miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Populus nigra



ABOUT THIS RECORD

ID: MNEST002120
species: Populus nigra
miRNA family: MIRf89
source: miRNEST

Taxonomy by NCBI:
Populus nigra Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTTGGTAACACCAATTGGGT

miRNA*
CCAATTGGTGTTACCAACATA

mismatches: 0
bulges: 0

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pre-miRNA
AAAAGAACAGCGGTAAAAATGCAACCACCAAATTGGAAGAAAGGAGCATTATGTTGGTAACACCAATTGGGTAGTTTGCTTCTTTAAAGGACCATTTCTG
CCATCTTGAAGGTGTTTCACGGATTAAAATCAAGAAAGGCACCACCAACACGAAAAATAGGGAAATCTCTCTCCATGACAAATCCCAATCCTTGGTCCTT
TAAAGAAGCAAACTACCCAATTGGTGTTACCAACATAATGCTCCTTTCTTCCTTTTTTGTCATGTTAAAATTACCGAGCTCCTCT


dot-bracket secondary structure
...(((..((((((((....(((...((.(((..((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((
((.((((((...((..((...)).))...))))))..))))..........)))).((.((((...................)))).))...))))))))
))))))))))))))))))))))))))))))))))))))))))))))))))))..))).))..))).....)))))..)))..)))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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